Step-by-Step Guide to Auditing Payment Processor Fees for NY Businesses

Silviu Timaru
Jun 17, 2025By Silviu Timaru

Running a business in New York comes with various financial responsibilities, and one of them is managing payment processor fees. These fees can significantly affect your bottom line, so it is crucial to audit them regularly. This guide will take you through a step-by-step process to ensure you're not overpaying and that your business is getting the best possible rates.

Understanding Payment Processor Fees

Before diving into the audit process, it's essential to understand what payment processor fees are. These are charges imposed by financial institutions to process credit card transactions. They can vary based on several factors, including the type of card used and the transaction's risk level. Common fees include interchange fees, assessment fees, and processor markup. Being familiar with these terms can help you identify areas where you might be overcharged.

credit card processing

Gathering Necessary Documents

The first step in auditing payment processor fees is to gather all relevant documents. This includes monthly statements from your payment processor, merchant agreements, and any communication regarding fee changes. Having a comprehensive view of your documentation will allow you to compare what you're being charged with industry standards and your original contract terms.

Ensure that your records are up-to-date and complete. Missing documents can lead to inaccurate audits, so it's crucial to have everything on hand. If you find discrepancies, contact your payment processor for clarification or additional information.

Analyzing Fees

Once you have all the necessary documents, the next step is to analyze the fees you're being charged. Break down each fee to understand what it's for and why it was applied. Use a spreadsheet to list each type of fee along with its corresponding amount and any relevant notes on its purpose.

financial analysis

Compare these amounts with industry averages and your contract terms. Look for any unexpected charges or significant discrepancies. Identifying these can help you pinpoint areas where you might be able to negotiate better rates or switch providers if necessary.

Negotiating Better Rates

If your audit reveals that you're paying higher fees than necessary, it may be time to negotiate better rates with your payment processor. Contact them with your findings and express your concerns. Often, processors may offer reduced fees or special rates to retain your business.

Be prepared with data from your audit that supports your request for lower rates. It's also helpful to research competitor services to use as leverage in negotiations. Remember, being informed and assertive can lead to significant savings for your business.

business negotiation

Considering Alternative Solutions

Sometimes, despite negotiation efforts, you may find that your current payment processor cannot offer competitive rates. In such cases, it might be worth considering alternative solutions. Research other providers and compare their fees, services, and reviews from other businesses similar to yours.

Switching processors can seem daunting, but it could be a strategic move for long-term savings. Ensure that any new provider can seamlessly integrate with your existing systems and offers transparent fee structures.

Maintaining Regular Audits

Conducting regular audits of your payment processor fees should become a routine practice for your business. Aim to perform these audits at least annually or whenever there are significant changes in your transaction volume or business model.

Regular audits not only help in identifying potential overcharges but also keep you informed about market trends and competitive rates. Staying proactive in managing these fees ensures that you're maximizing profitability and minimizing unnecessary expenses.